Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slf1Q8R3P9 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slf1Q8R3P9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slf1Q8R3P9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.49■□□□□ 0.23
Slf1Q8R3P9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slf1Q8R3P9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.48■□□□□ 0.23
Slf1Q8R3P9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slf1Q8R3P9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms