Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim2Q8R1G6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim2Q8R1G6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm12134-201ENSMUST00000122109 520 ntBASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim2Q8R1G6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pdlim2Q8R1G6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pdlim2Q8R1G6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
Pdlim2Q8R1G6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim2Q8R1G6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim2Q8R1G6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms