Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Gm15372-201ENSMUST00000120729 834 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Gm27867-201ENSMUST00000184778 125 ntBASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Gm34391-201ENSMUST00000203706 907 ntBASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp40Q8R1F9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp40Q8R1F9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpp40Q8R1F9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpp40Q8R1F9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp40Q8R1F9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms