Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col23a1Q8K4G2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col23a1Q8K4G2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col23a1Q8K4G2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col23a1Q8K4G2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col23a1Q8K4G2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col23a1Q8K4G2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Gm18889-201ENSMUST00000174284 929 ntBASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col23a1Q8K4G2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Mir449b-201ENSMUST00000104833 80 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gm8344-201ENSMUST00000119813 856 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Mir6977-201ENSMUST00000184960 64 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gm43125-201ENSMUST00000201724 730 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col23a1Q8K4G2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Gm27622-201ENSMUST00000183779 60 ntBASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.67■□□□□ 0.74
Col23a1Q8K4G2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Col23a1Q8K4G2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms