Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm13158-201ENSMUST00000122007 736 ntBASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm6576-201ENSMUST00000169678 883 ntBASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm27275-201ENSMUST00000184318 272 ntBASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 AC140264.2-202ENSMUST00000218746 817 ntBASIC10.27□□□□□ -0.77
Cystm1Q8K353 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Gm15378-201ENSMUST00000121894 207 ntBASIC10.26□□□□□ -0.77
Cystm1Q8K353 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.26□□□□□ -0.77
Cystm1Q8K353 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.26□□□□□ -0.77
Cystm1Q8K353 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.26□□□□□ -0.77
Cystm1Q8K353 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cystm1Q8K353 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gm11249-201ENSMUST00000117071 859 ntBASIC10.25□□□□□ -0.77
Cystm1Q8K353 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gm10252-201ENSMUST00000209541 832 ntBASIC10.25□□□□□ -0.77
Cystm1Q8K353 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms