Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcll1Q8JZS7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Mir6404-201ENSMUST00000183699 94 ntBASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcll1Q8JZS7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44357-201ENSMUST00000195897 142 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm19658-201ENSMUST00000196231 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44367-201ENSMUST00000196836 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44350-201ENSMUST00000197197 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44390-201ENSMUST00000197533 144 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44313-201ENSMUST00000198018 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44486-201ENSMUST00000198508 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44314-201ENSMUST00000199263 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44394-201ENSMUST00000199558 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44484-201ENSMUST00000199873 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44466-201ENSMUST00000200264 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Gm44359-201ENSMUST00000200671 138 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Mzt1-203ENSMUST00000227948 952 ntBASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcll1Q8JZS7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Hmgcll1Q8JZS7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Rps4l-201ENSMUST00000071745 943 ntBASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcll1Q8JZS7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcll1Q8JZS7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcll1Q8JZS7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms