Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Sox30Q8CGW4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Gm16061-201ENSMUST00000122167 857 ntBASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox30Q8CGW4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Gm13474-201ENSMUST00000122466 815 ntBASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox30Q8CGW4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox30Q8CGW4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox30Q8CGW4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox30Q8CGW4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms