Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.79■□□□□ 0.12
Rdh1Q8CGV4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.78■□□□□ 0.12
Rdh1Q8CGV4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44357-201ENSMUST00000195897 142 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm19658-201ENSMUST00000196231 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44367-201ENSMUST00000196836 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44350-201ENSMUST00000197197 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44390-201ENSMUST00000197533 144 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44313-201ENSMUST00000198018 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44486-201ENSMUST00000198508 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44314-201ENSMUST00000199263 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44394-201ENSMUST00000199558 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44484-201ENSMUST00000199873 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44466-201ENSMUST00000200264 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm44359-201ENSMUST00000200671 138 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Rps4l-201ENSMUST00000071745 943 ntBASIC15.77■□□□□ 0.12
Rdh1Q8CGV4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rdh1Q8CGV4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Gm7506-201ENSMUST00000207758 815 ntBASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh1Q8CGV4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms