Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc28bQ8CEG5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm43183-201ENSMUST00000200632 547 ntBASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc28bQ8CEG5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Gm9731-201ENSMUST00000209480 747 ntBASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc28bQ8CEG5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Gm37179-201ENSMUST00000194862 823 ntBASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc28bQ8CEG5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Gm27275-201ENSMUST00000184318 272 ntBASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Gm18666-201ENSMUST00000190039 958 ntBASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.09■□□□□ 0.17
Ccdc28bQ8CEG5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms