Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim52Q8CDV4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.04■□□□□ 0.8
Trim52Q8CDV4 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim52Q8CDV4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm14140-201ENSMUST00000119999 995 ntBASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim52Q8CDV4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.02■□□□□ 0.8
Trim52Q8CDV4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim52Q8CDV4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim52Q8CDV4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Trim52Q8CDV4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
Trim52Q8CDV4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms