Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.44■□□□□ 0.06
Cdk5rap1Q8BTW8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm27867-201ENSMUST00000184778 125 ntBASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdk5rap1Q8BTW8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdk5rap1Q8BTW8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm13884-201ENSMUST00000118103 829 ntBASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Gm5864-201ENSMUST00000202263 970 ntBASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms