Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Gm15372-201ENSMUST00000120729 834 ntBASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Gm12895-201ENSMUST00000122214 226 ntBASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup54Q8BTS4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Nup54Q8BTS4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup54Q8BTS4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup54Q8BTS4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup54Q8BTS4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms