Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rd3Q8BRE0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Rd3Q8BRE0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rd3Q8BRE0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.24■□□□□ 0.35
Rd3Q8BRE0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rd3Q8BRE0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rd3Q8BRE0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Gm13418-201ENSMUST00000119097 944 ntBASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms