Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Gm17971-201ENSMUST00000190239 806 ntBASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Gm18669-201ENSMUST00000216049 778 ntBASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab11fip4Q8BQP8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab11fip4Q8BQP8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Gm28033-201ENSMUST00000184224 96 ntBASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab11fip4Q8BQP8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Gm13186-201ENSMUST00000118031 316 ntBASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip4Q8BQP8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms