Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Gm11950-201ENSMUST00000121615 838 ntBASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm4Q8BKA3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm4Q8BKA3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm4Q8BKA3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Gm21362-201ENSMUST00000194272 928 ntBASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Srrm4Q8BKA3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms