Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.33□□□□□ -0.28
Sox21Q811W0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox21Q811W0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Sox21Q811W0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.32□□□□□ -0.28
Sox21Q811W0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox21Q811W0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox21Q811W0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Gm13216-201ENSMUST00000117145 591 ntBASIC13.31□□□□□ -0.28
Sox21Q811W0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.31□□□□□ -0.28
Sox21Q811W0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.31□□□□□ -0.28
Sox21Q811W0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox21Q811W0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.3□□□□□ -0.28
Sox21Q811W0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Gm12895-201ENSMUST00000122214 226 ntBASIC13.3□□□□□ -0.28
Sox21Q811W0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox21Q811W0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox21Q811W0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox21Q811W0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox21Q811W0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox21Q811W0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox21Q811W0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox21Q811W0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Sox21Q811W0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox21Q811W0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Sox21Q811W0 Gm5864-201ENSMUST00000202263 970 ntBASIC13.29□□□□□ -0.28
Sox21Q811W0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms