Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm44314-201ENSMUST00000199263 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44394-201ENSMUST00000199558 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44484-201ENSMUST00000199873 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44466-201ENSMUST00000200264 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44359-201ENSMUST00000200671 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm6376-201ENSMUST00000209407 580 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1l1Q6T3U4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Gm7862-201ENSMUST00000121461 292 ntBASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.45■□□□□ 0.7
Npc1l1Q6T3U4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1l1Q6T3U4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Mir5131-201ENSMUST00000175426 93 ntBASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1l1Q6T3U4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Npc1l1Q6T3U4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms