Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CtifQ6PEE2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.42■□□□□ 0.38
CtifQ6PEE2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtifQ6PEE2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.4■□□□□ 0.38
CtifQ6PEE2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CtifQ6PEE2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CtifQ6PEE2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CtifQ6PEE2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.39■□□□□ 0.37
CtifQ6PEE2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.39■□□□□ 0.37
CtifQ6PEE2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.39■□□□□ 0.37
CtifQ6PEE2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CtifQ6PEE2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms