Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ShbQ6PD21 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.55■□□□□ 0.4
ShbQ6PD21 Gm12428-201ENSMUST00000119844 727 ntBASIC17.55■□□□□ 0.4
ShbQ6PD21 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ShbQ6PD21 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.55■□□□□ 0.4
ShbQ6PD21 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ShbQ6PD21 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ShbQ6PD21 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.55■□□□□ 0.4
ShbQ6PD21 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.54■□□□□ 0.4
ShbQ6PD21 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.54■□□□□ 0.4
ShbQ6PD21 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.54■□□□□ 0.4
ShbQ6PD21 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ShbQ6PD21 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShbQ6PD21 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ShbQ6PD21 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
ShbQ6PD21 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Mir449b-201ENSMUST00000104833 80 ntBASIC17.53■□□□□ 0.4
ShbQ6PD21 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ShbQ6PD21 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShbQ6PD21 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ShbQ6PD21 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
ShbQ6PD21 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ShbQ6PD21 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ShbQ6PD21 Gm11424-201ENSMUST00000121929 829 ntBASIC17.52■□□□□ 0.4
ShbQ6PD21 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.52■□□□□ 0.4
ShbQ6PD21 Gm43125-201ENSMUST00000201724 730 ntBASIC17.52■□□□□ 0.4
ShbQ6PD21 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
ShbQ6PD21 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShbQ6PD21 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ShbQ6PD21 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShbQ6PD21 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShbQ6PD21 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShbQ6PD21 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShbQ6PD21 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ShbQ6PD21 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ShbQ6PD21 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.51■□□□□ 0.39
ShbQ6PD21 Rprl2-201ENSMUST00000157150 290 ntBASIC17.51■□□□□ 0.39
ShbQ6PD21 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ShbQ6PD21 Gm27622-201ENSMUST00000183779 60 ntBASIC17.51■□□□□ 0.39
ShbQ6PD21 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ShbQ6PD21 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.51■□□□□ 0.39
ShbQ6PD21 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms