Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cgnl1Q6AW69 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Dancr-204ENSMUST00000132389 2347 ntBASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cgnl1Q6AW69 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Gm11355-201ENSMUST00000121120 306 ntBASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cgnl1Q6AW69 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cgnl1Q6AW69 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cgnl1Q6AW69 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cgnl1Q6AW69 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cgnl1Q6AW69 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cgnl1Q6AW69 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Cgnl1Q6AW69 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cgnl1Q6AW69 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms