Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcn1Q64347 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.54■□□□□ 0.88
Clcn1Q64347 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.54■□□□□ 0.88
Clcn1Q64347 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Clcn1Q64347 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcn1Q64347 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn1Q64347 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clcn1Q64347 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Gm12260-201ENSMUST00000122447 411 ntBASIC20.53■□□□□ 0.88
Clcn1Q64347 Gm11780-201ENSMUST00000136880 516 ntBASIC20.53■□□□□ 0.88
Clcn1Q64347 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clcn1Q64347 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.53■□□□□ 0.88
Clcn1Q64347 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.53■□□□□ 0.88
Clcn1Q64347 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clcn1Q64347 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn1Q64347 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.52■□□□□ 0.88
Clcn1Q64347 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Gm15467-201ENSMUST00000120582 445 ntBASIC20.52■□□□□ 0.88
Clcn1Q64347 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Clcn1Q64347 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.52■□□□□ 0.88
Clcn1Q64347 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn1Q64347 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn1Q64347 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn1Q64347 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn1Q64347 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn1Q64347 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Clcn1Q64347 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn1Q64347 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clcn1Q64347 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clcn1Q64347 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm8097-201ENSMUST00000117903 829 ntBASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm4459-201ENSMUST00000118750 468 ntBASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm27702-201ENSMUST00000184512 56 ntBASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm27628-201ENSMUST00000184911 107 ntBASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm43575-201ENSMUST00000196420 516 ntBASIC20.51■□□□□ 0.87
Clcn1Q64347 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.51■□□□□ 0.87
Clcn1Q64347 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.51■□□□□ 0.87
Clcn1Q64347 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn1Q64347 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn1Q64347 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn1Q64347 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.5■□□□□ 0.87
Clcn1Q64347 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn1Q64347 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.5■□□□□ 0.87
Clcn1Q64347 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn1Q64347 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.5■□□□□ 0.87
Clcn1Q64347 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn1Q64347 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms