Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Commd3Q63829 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Commd3Q63829 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Commd3Q63829 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Commd3Q63829 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Commd3Q63829 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.63□□□□□ -0.23
Commd3Q63829 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.63□□□□□ -0.23
Commd3Q63829 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.63□□□□□ -0.23
Commd3Q63829 Gm18671-201ENSMUST00000214826 683 ntBASIC13.63□□□□□ -0.23
Commd3Q63829 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Commd3Q63829 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Commd3Q63829 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.62□□□□□ -0.23
Commd3Q63829 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.62□□□□□ -0.23
Commd3Q63829 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Commd3Q63829 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Commd3Q63829 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Commd3Q63829 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.62□□□□□ -0.23
Commd3Q63829 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Commd3Q63829 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Commd3Q63829 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.61□□□□□ -0.23
Commd3Q63829 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Commd3Q63829 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.61□□□□□ -0.23
Commd3Q63829 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Mir6349-201ENSMUST00000184059 97 ntBASIC13.61□□□□□ -0.23
Commd3Q63829 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.61□□□□□ -0.23
Commd3Q63829 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.61□□□□□ -0.23
Commd3Q63829 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Commd3Q63829 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Commd3Q63829 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Commd3Q63829 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Commd3Q63829 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Commd3Q63829 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Commd3Q63829 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Commd3Q63829 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms