Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.52■□□□□ 0.24
Sdf4Q61112 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.52■□□□□ 0.24
Sdf4Q61112 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Gm36967-201ENSMUST00000193814 266 ntBASIC16.52■□□□□ 0.24
Sdf4Q61112 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdf4Q61112 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.52■□□□□ 0.24
Sdf4Q61112 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.52■□□□□ 0.23
Sdf4Q61112 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.52■□□□□ 0.23
Sdf4Q61112 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.52■□□□□ 0.23
Sdf4Q61112 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.52■□□□□ 0.23
Sdf4Q61112 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdf4Q61112 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sdf4Q61112 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdf4Q61112 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdf4Q61112 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdf4Q61112 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Sdf4Q61112 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Sdf4Q61112 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sdf4Q61112 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sdf4Q61112 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sdf4Q61112 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.51■□□□□ 0.23
Sdf4Q61112 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdf4Q61112 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.5■□□□□ 0.23
Sdf4Q61112 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm11950-201ENSMUST00000121615 838 ntBASIC16.5■□□□□ 0.23
Sdf4Q61112 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm10052-201ENSMUST00000168019 960 ntBASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.5■□□□□ 0.23
Sdf4Q61112 Gm7729-201ENSMUST00000050143 801 ntBASIC16.5■□□□□ 0.23
Sdf4Q61112 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sdf4Q61112 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sdf4Q61112 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sdf4Q61112 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.49■□□□□ 0.23
Sdf4Q61112 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sdf4Q61112 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sdf4Q61112 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sdf4Q61112 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms