Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.01■□□□□ 0.15
Col12a1Q60847 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Rprl2-201ENSMUST00000157150 290 ntBASIC16.01■□□□□ 0.15
Col12a1Q60847 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.01■□□□□ 0.15
Col12a1Q60847 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col12a1Q60847 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col12a1Q60847 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col12a1Q60847 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.01■□□□□ 0.15
Col12a1Q60847 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col12a1Q60847 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16■□□□□ 0.15
Col12a1Q60847 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16■□□□□ 0.15
Col12a1Q60847 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col12a1Q60847 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16■□□□□ 0.15
Col12a1Q60847 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col12a1Q60847 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.99■□□□□ 0.15
Col12a1Q60847 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.99■□□□□ 0.15
Col12a1Q60847 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.99■□□□□ 0.15
Col12a1Q60847 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.99■□□□□ 0.15
Col12a1Q60847 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
Col12a1Q60847 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Gm43125-201ENSMUST00000201724 730 ntBASIC15.99■□□□□ 0.15
Col12a1Q60847 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.99■□□□□ 0.15
Col12a1Q60847 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col12a1Q60847 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col12a1Q60847 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col12a1Q60847 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Col12a1Q60847 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col12a1Q60847 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.97■□□□□ 0.15
Col12a1Q60847 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col12a1Q60847 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.97■□□□□ 0.15
Col12a1Q60847 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.97■□□□□ 0.15
Col12a1Q60847 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col12a1Q60847 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.97■□□□□ 0.15
Col12a1Q60847 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Gm18187-201ENSMUST00000196476 984 ntBASIC15.97■□□□□ 0.15
Col12a1Q60847 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.97■□□□□ 0.15
Col12a1Q60847 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms