Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Gm13312-201ENSMUST00000119631 718 ntBASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfaip3Q60769 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Gm17971-201ENSMUST00000190239 806 ntBASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfaip3Q60769 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Rprl3-201ENSMUST00000157400 290 ntBASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfaip3Q60769 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfaip3Q60769 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.26■□□□□ 0.03
Tnfaip3Q60769 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfaip3Q60769 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms