Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-2Q5R1I3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-2Q5R1I3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7-2Q5R1I3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7-2Q5R1I3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7-2Q5R1I3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms