Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Gm15372-201ENSMUST00000120729 834 ntBASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-4Q5R1I0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Gm24589-201ENSMUST00000116692 94 ntBASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Gm44454-201ENSMUST00000198541 138 ntBASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-4Q5R1I0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms