Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Gm18421-201ENSMUST00000204122 625 ntBASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5d-4Q5R1F6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5d-4Q5R1F6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Gm6433-201ENSMUST00000118634 875 ntBASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5d-4Q5R1F6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5d-4Q5R1F6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms