Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-2Q5R1B6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-2Q5R1B6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-2Q5R1B6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm8825-201ENSMUST00000182565 998 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm4518-201ENSMUST00000182638 718 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-2Q5R1B6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-2Q5R1B6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Gm37153-201ENSMUST00000193637 231 ntBASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Gm8396-201ENSMUST00000057361 823 ntBASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-2Q5R1B6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Gm45167-201ENSMUST00000208007 322 ntBASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-2Q5R1B6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms