Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Syne3Q4FZC9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Syne3Q4FZC9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne3Q4FZC9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syne3Q4FZC9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Gm6659-201ENSMUST00000174752 547 ntBASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Gm18115-201ENSMUST00000221209 621 ntBASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Phf7-203ENSMUST00000226565 1971 ntBASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syne3Q4FZC9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syne3Q4FZC9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Gm23634-201ENSMUST00000175071 91 ntBASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syne3Q4FZC9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Syne3Q4FZC9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms