Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank3Q4ACU6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.19■□□□□ 0.82
Shank3Q4ACU6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.19■□□□□ 0.82
Shank3Q4ACU6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Gm13216-201ENSMUST00000117145 591 ntBASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Gm11025-201ENSMUST00000140773 466 ntBASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shank3Q4ACU6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Mir1895-201ENSMUST00000122615 79 ntBASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shank3Q4ACU6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.16■□□□□ 0.82
Shank3Q4ACU6 AA543401-201ENSMUST00000164248 1269 ntBASIC20.16■□□□□ 0.82
Shank3Q4ACU6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Gm25948-201ENSMUST00000175334 112 ntBASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shank3Q4ACU6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Shank3Q4ACU6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Shank3Q4ACU6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Shank3Q4ACU6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms