Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Gm9731-201ENSMUST00000209480 747 ntBASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cnga4Q3UW12 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnga4Q3UW12 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.58■□□□□ 0.25
Cnga4Q3UW12 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnga4Q3UW12 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cnga4Q3UW12 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Gm18284-201ENSMUST00000172604 624 ntBASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Gm27405-201ENSMUST00000184201 112 ntBASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cnga4Q3UW12 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gm12933-201ENSMUST00000120203 872 ntBASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.57■□□□□ 0.24
Cnga4Q3UW12 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cnga4Q3UW12 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cnga4Q3UW12 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.55■□□□□ 0.24
Cnga4Q3UW12 Gm18958-201ENSMUST00000174258 762 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms