Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Gm44771-201ENSMUST00000206975 626 ntBASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Khdc4Q3TCX3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Mzt1-203ENSMUST00000227948 952 ntBASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Khdc4Q3TCX3 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Phf7-203ENSMUST00000226565 1971 ntBASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Gm34391-201ENSMUST00000203706 907 ntBASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Khdc4Q3TCX3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Khdc4Q3TCX3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Khdc4Q3TCX3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Khdc4Q3TCX3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Gm13186-201ENSMUST00000118031 316 ntBASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Khdc4Q3TCX3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms