Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col10a1Q05306 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.03■□□□□ -0
Col10a1Q05306 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col10a1Q05306 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.02■□□□□ -0
Col10a1Q05306 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.02■□□□□ -0
Col10a1Q05306 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.02■□□□□ -0
Col10a1Q05306 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Col10a1Q05306 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.02■□□□□ -0
Col10a1Q05306 Gm33142-201ENSMUST00000193913 867 ntBASIC15.02■□□□□ -0
Col10a1Q05306 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col10a1Q05306 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col10a1Q05306 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.02□□□□□ -0.01
Col10a1Q05306 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col10a1Q05306 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.02□□□□□ -0.01
Col10a1Q05306 Haglr-201ENSMUST00000100000 2085 ntBASIC15.02□□□□□ -0.01
Col10a1Q05306 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col10a1Q05306 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col10a1Q05306 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col10a1Q05306 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col10a1Q05306 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col10a1Q05306 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.01□□□□□ -0.01
Col10a1Q05306 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.01□□□□□ -0.01
Col10a1Q05306 Gm45328-201ENSMUST00000210942 917 ntBASIC15.01□□□□□ -0.01
Col10a1Q05306 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col10a1Q05306 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col10a1Q05306 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col10a1Q05306 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15□□□□□ -0.01
Col10a1Q05306 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Col10a1Q05306 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col10a1Q05306 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Col10a1Q05306 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col10a1Q05306 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col10a1Q05306 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.99□□□□□ -0.01
Col10a1Q05306 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col10a1Q05306 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.99□□□□□ -0.01
Col10a1Q05306 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col10a1Q05306 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.99□□□□□ -0.01
Col10a1Q05306 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Gm7284-201ENSMUST00000131667 944 ntBASIC14.99□□□□□ -0.01
Col10a1Q05306 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.99□□□□□ -0.01
Col10a1Q05306 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col10a1Q05306 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.99□□□□□ -0.01
Col10a1Q05306 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.99□□□□□ -0.01
Col10a1Q05306 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col10a1Q05306 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms