Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Emx1Q04742 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.22■□□□□ 0.03
Emx1Q04742 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.22■□□□□ 0.03
Emx1Q04742 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.22■□□□□ 0.03
Emx1Q04742 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.22■□□□□ 0.03
Emx1Q04742 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.22■□□□□ 0.03
Emx1Q04742 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Emx1Q04742 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Emx1Q04742 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.21■□□□□ 0.03
Emx1Q04742 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.21■□□□□ 0.03
Emx1Q04742 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Emx1Q04742 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Emx1Q04742 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Gm13559-201ENSMUST00000120476 863 ntBASIC15.21■□□□□ 0.03
Emx1Q04742 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Emx1Q04742 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.21■□□□□ 0.02
Emx1Q04742 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Emx1Q04742 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Emx1Q04742 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Emx1Q04742 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Emx1Q04742 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.2■□□□□ 0.02
Emx1Q04742 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.2■□□□□ 0.02
Emx1Q04742 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Emx1Q04742 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Emx1Q04742 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.19■□□□□ 0.02
Emx1Q04742 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Emx1Q04742 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Emx1Q04742 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.19■□□□□ 0.02
Emx1Q04742 Gm11539-201ENSMUST00000119837 557 ntBASIC15.19■□□□□ 0.02
Emx1Q04742 Gm13436-201ENSMUST00000120418 567 ntBASIC15.19■□□□□ 0.02
Emx1Q04742 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.19■□□□□ 0.02
Emx1Q04742 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Emx1Q04742 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms