Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.7□□□□□ -0.22
SgcaP82350 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SgcaP82350 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SgcaP82350 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.69□□□□□ -0.22
SgcaP82350 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.69□□□□□ -0.22
SgcaP82350 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcaP82350 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcaP82350 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Prob1-201ENSMUST00000097619 3021 ntBASIC13.68□□□□□ -0.22
SgcaP82350 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SgcaP82350 Rab3c-203ENSMUST00000224180 967 ntBASIC13.68□□□□□ -0.22
SgcaP82350 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SgcaP82350 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcaP82350 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcaP82350 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SgcaP82350 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcaP82350 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcaP82350 Gm42569-201ENSMUST00000200539 472 ntBASIC13.67□□□□□ -0.22
SgcaP82350 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SgcaP82350 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms