Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hmgb1P63158 Mir1668-201ENSMUST00000184114 107 ntBASIC17.92■□□□□ 0.46
Hmgb1P63158 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hmgb1P63158 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgb1P63158 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb1P63158 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Gm13559-201ENSMUST00000120476 863 ntBASIC17.91■□□□□ 0.46
Hmgb1P63158 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.91■□□□□ 0.46
Hmgb1P63158 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hmgb1P63158 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgb1P63158 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hmgb1P63158 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Hmgb1P63158 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgb1P63158 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.9■□□□□ 0.46
Hmgb1P63158 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.9■□□□□ 0.46
Hmgb1P63158 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgb1P63158 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.9■□□□□ 0.46
Hmgb1P63158 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgb1P63158 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgb1P63158 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Hmgb1P63158 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Hmgb1P63158 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Gm36967-201ENSMUST00000193814 266 ntBASIC17.89■□□□□ 0.45
Hmgb1P63158 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.89■□□□□ 0.45
Hmgb1P63158 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.89■□□□□ 0.45
Hmgb1P63158 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.89■□□□□ 0.45
Hmgb1P63158 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgb1P63158 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgb1P63158 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.88■□□□□ 0.45
Hmgb1P63158 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Gm10566-201ENSMUST00000086739 996 ntBASIC17.88■□□□□ 0.45
Hmgb1P63158 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgb1P63158 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgb1P63158 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgb1P63158 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgb1P63158 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgb1P63158 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms