Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.49■□□□□ 0.23
ThraP63058 Gm11950-201ENSMUST00000121615 838 ntBASIC16.49■□□□□ 0.23
ThraP63058 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.49■□□□□ 0.23
ThraP63058 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.49■□□□□ 0.23
ThraP63058 Gm17971-201ENSMUST00000190239 806 ntBASIC16.49■□□□□ 0.23
ThraP63058 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.49■□□□□ 0.23
ThraP63058 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ThraP63058 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.49■□□□□ 0.23
ThraP63058 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ThraP63058 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ThraP63058 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ThraP63058 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Actl10-202ENSMUST00000226583 1501 ntBASIC16.49■□□□□ 0.23
ThraP63058 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ThraP63058 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ThraP63058 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.48■□□□□ 0.23
ThraP63058 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.48■□□□□ 0.23
ThraP63058 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ThraP63058 Gm17807-201ENSMUST00000186869 298 ntBASIC16.48■□□□□ 0.23
ThraP63058 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ThraP63058 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ThraP63058 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ThraP63058 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.47■□□□□ 0.23
ThraP63058 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ThraP63058 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.47■□□□□ 0.23
ThraP63058 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Gm18958-201ENSMUST00000174258 762 ntBASIC16.47■□□□□ 0.23
ThraP63058 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ThraP63058 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ThraP63058 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ThraP63058 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ThraP63058 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ThraP63058 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ThraP63058 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ThraP63058 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ThraP63058 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ThraP63058 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ThraP63058 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms