Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tubgcp3P58854 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tubgcp3P58854 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Gm27389-201ENSMUST00000183622 195 ntBASIC16.64■□□□□ 0.25
Tubgcp3P58854 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.64■□□□□ 0.25
Tubgcp3P58854 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tubgcp3P58854 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm22697-201ENSMUST00000175194 63 ntBASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm29707-201ENSMUST00000196325 491 ntBASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm21559-201ENSMUST00000220638 855 ntBASIC16.63■□□□□ 0.25
Tubgcp3P58854 Gm8587-201ENSMUST00000076538 843 ntBASIC16.63■□□□□ 0.25
Tubgcp3P58854 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubgcp3P58854 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.62■□□□□ 0.25
Tubgcp3P58854 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubgcp3P58854 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubgcp3P58854 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms