Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Strn4P58404 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Strn4P58404 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Strn4P58404 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Strn4P58404 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Strn4P58404 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.45■□□□□ 0.86
Strn4P58404 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Strn4P58404 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Strn4P58404 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Gm12260-201ENSMUST00000122447 411 ntBASIC20.44■□□□□ 0.86
Strn4P58404 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.44■□□□□ 0.86
Strn4P58404 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.44■□□□□ 0.86
Strn4P58404 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Strn4P58404 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.44■□□□□ 0.86
Strn4P58404 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Strn4P58404 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Strn4P58404 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Strn4P58404 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.43■□□□□ 0.86
Strn4P58404 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Strn4P58404 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.43■□□□□ 0.86
Strn4P58404 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.43■□□□□ 0.86
Strn4P58404 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.43■□□□□ 0.86
Strn4P58404 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.43■□□□□ 0.86
Strn4P58404 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Strn4P58404 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Strn4P58404 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Strn4P58404 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Gm7230-201ENSMUST00000173026 815 ntBASIC20.42■□□□□ 0.86
Strn4P58404 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.42■□□□□ 0.86
Strn4P58404 Psmb5-202ENSMUST00000227257 622 ntBASIC20.42■□□□□ 0.86
Strn4P58404 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.42■□□□□ 0.86
Strn4P58404 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Strn4P58404 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.41■□□□□ 0.86
Strn4P58404 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.41■□□□□ 0.86
Strn4P58404 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.41■□□□□ 0.86
Strn4P58404 Gm15467-201ENSMUST00000120582 445 ntBASIC20.41■□□□□ 0.86
Strn4P58404 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Strn4P58404 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.41■□□□□ 0.86
Strn4P58404 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.41■□□□□ 0.86
Strn4P58404 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.41■□□□□ 0.86
Strn4P58404 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Strn4P58404 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Strn4P58404 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Strn4P58404 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Strn4P58404 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Strn4P58404 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms