Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.2□□□□□ -0.3
Sssca1P56873 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.2□□□□□ -0.3
Sssca1P56873 Gm38027-201ENSMUST00000192315 235 ntBASIC13.2□□□□□ -0.3
Sssca1P56873 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sssca1P56873 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.2□□□□□ -0.3
Sssca1P56873 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sssca1P56873 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sssca1P56873 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Sssca1P56873 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sssca1P56873 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.19□□□□□ -0.3
Sssca1P56873 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Sssca1P56873 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.19□□□□□ -0.3
Sssca1P56873 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sssca1P56873 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.19□□□□□ -0.3
Sssca1P56873 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.19□□□□□ -0.3
Sssca1P56873 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sssca1P56873 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Sssca1P56873 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Sssca1P56873 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sssca1P56873 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.18□□□□□ -0.3
Sssca1P56873 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.18□□□□□ -0.3
Sssca1P56873 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sssca1P56873 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Sssca1P56873 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Gm5643-201ENSMUST00000117081 966 ntBASIC13.18□□□□□ -0.3
Sssca1P56873 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sssca1P56873 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.18□□□□□ -0.3
Sssca1P56873 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sssca1P56873 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sssca1P56873 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sssca1P56873 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sssca1P56873 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms