Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdh11P55288 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdh11P55288 Gm45058-201ENSMUST00000205810 766 ntBASIC14.88□□□□□ -0.03
Cdh11P55288 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdh11P55288 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdh11P55288 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cdh11P55288 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdh11P55288 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdh11P55288 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh11P55288 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdh11P55288 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh11P55288 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh11P55288 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdh11P55288 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Cdh11P55288 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Mir5130-201ENSMUST00000175160 84 ntBASIC14.87□□□□□ -0.03
Cdh11P55288 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdh11P55288 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Cdh11P55288 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh11P55288 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cdh11P55288 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.86□□□□□ -0.03
Cdh11P55288 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh11P55288 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdh11P55288 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh11P55288 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdh11P55288 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdh11P55288 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh11P55288 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh11P55288 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh11P55288 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Gm7638-201ENSMUST00000121348 967 ntBASIC14.85□□□□□ -0.03
Cdh11P55288 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh11P55288 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdh11P55288 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh11P55288 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.85□□□□□ -0.03
Cdh11P55288 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdh11P55288 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdh11P55288 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh11P55288 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms