Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ephb3P54754 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.05■□□□□ 0.32
Ephb3P54754 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ephb3P54754 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ephb3P54754 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.04■□□□□ 0.32
Ephb3P54754 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.04■□□□□ 0.32
Ephb3P54754 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.04■□□□□ 0.32
Ephb3P54754 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.04■□□□□ 0.32
Ephb3P54754 Chchd1-203ENSMUST00000224633 557 ntBASIC17.04■□□□□ 0.32
Ephb3P54754 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Ephb3P54754 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.04■□□□□ 0.32
Ephb3P54754 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ephb3P54754 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ephb3P54754 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.03■□□□□ 0.32
Ephb3P54754 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 Gm8655-201ENSMUST00000221159 852 ntBASIC17.03■□□□□ 0.32
Ephb3P54754 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ephb3P54754 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ephb3P54754 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.02■□□□□ 0.32
Ephb3P54754 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 Gm14057-201ENSMUST00000120631 482 ntBASIC17.02■□□□□ 0.32
Ephb3P54754 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.02■□□□□ 0.32
Ephb3P54754 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.02■□□□□ 0.32
Ephb3P54754 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.02■□□□□ 0.32
Ephb3P54754 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ephb3P54754 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.02■□□□□ 0.32
Ephb3P54754 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ephb3P54754 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ephb3P54754 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.02■□□□□ 0.31
Ephb3P54754 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ephb3P54754 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ephb3P54754 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ephb3P54754 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ephb3P54754 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.01■□□□□ 0.31
Ephb3P54754 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
Ephb3P54754 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.01■□□□□ 0.31
Ephb3P54754 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ephb3P54754 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ephb3P54754 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.01■□□□□ 0.31
Ephb3P54754 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ephb3P54754 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.01■□□□□ 0.31
Ephb3P54754 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ephb3P54754 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17■□□□□ 0.31
Ephb3P54754 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17■□□□□ 0.31
Ephb3P54754 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17■□□□□ 0.31
Ephb3P54754 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ephb3P54754 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17■□□□□ 0.31
Ephb3P54754 AC159106.1-201ENSMUST00000224421 690 ntBASIC17■□□□□ 0.31
Ephb3P54754 Ddx41-204ENSMUST00000224765 2199 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms