Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atoh1P48985 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atoh1P48985 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.37■□□□□ 0.53
Atoh1P48985 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atoh1P48985 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atoh1P48985 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atoh1P48985 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.36■□□□□ 0.53
Atoh1P48985 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Gm4899-201ENSMUST00000178708 719 ntBASIC18.36■□□□□ 0.53
Atoh1P48985 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.36■□□□□ 0.53
Atoh1P48985 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.36■□□□□ 0.53
Atoh1P48985 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Atoh1P48985 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atoh1P48985 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atoh1P48985 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Atoh1P48985 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Atoh1P48985 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.35■□□□□ 0.53
Atoh1P48985 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Gm37153-201ENSMUST00000193637 231 ntBASIC18.35■□□□□ 0.53
Atoh1P48985 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.35■□□□□ 0.53
Atoh1P48985 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.35■□□□□ 0.53
Atoh1P48985 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.35■□□□□ 0.53
Atoh1P48985 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atoh1P48985 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atoh1P48985 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Atoh1P48985 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
Atoh1P48985 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Atoh1P48985 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Mir6956-201ENSMUST00000183598 62 ntBASIC18.34■□□□□ 0.53
Atoh1P48985 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.34■□□□□ 0.53
Atoh1P48985 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.34■□□□□ 0.53
Atoh1P48985 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.34■□□□□ 0.53
Atoh1P48985 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atoh1P48985 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atoh1P48985 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atoh1P48985 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atoh1P48985 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.33■□□□□ 0.53
Atoh1P48985 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atoh1P48985 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.33■□□□□ 0.52
Atoh1P48985 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.33■□□□□ 0.52
Atoh1P48985 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.33■□□□□ 0.52
Atoh1P48985 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Atoh1P48985 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atoh1P48985 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atoh1P48985 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atoh1P48985 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atoh1P48985 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atoh1P48985 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Atoh1P48985 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atoh1P48985 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atoh1P48985 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atoh1P48985 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms