Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.73□□□□□ -0.05
Rfx3P48381 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.73□□□□□ -0.05
Rfx3P48381 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfx3P48381 Mir6982-201ENSMUST00000184354 68 ntBASIC14.73□□□□□ -0.05
Rfx3P48381 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Rfx3P48381 Gm30025-201ENSMUST00000218555 728 ntBASIC14.73□□□□□ -0.05
Rfx3P48381 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfx3P48381 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfx3P48381 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.73□□□□□ -0.05
Rfx3P48381 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx3P48381 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.72□□□□□ -0.05
Rfx3P48381 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Rfx3P48381 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfx3P48381 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfx3P48381 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rfx3P48381 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rfx3P48381 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rfx3P48381 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.72□□□□□ -0.05
Rfx3P48381 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx3P48381 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rfx3P48381 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.71□□□□□ -0.05
Rfx3P48381 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.71□□□□□ -0.05
Rfx3P48381 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Gm37055-201ENSMUST00000191866 133 ntBASIC14.71□□□□□ -0.05
Rfx3P48381 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.71□□□□□ -0.05
Rfx3P48381 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rfx3P48381 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx3P48381 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx3P48381 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx3P48381 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx3P48381 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx3P48381 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms