Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm44450-201ENSMUST00000199528 114 ntBASIC17.06■□□□□ 0.32
Rfx2P48379 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx2P48379 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx2P48379 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx2P48379 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx2P48379 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rfx2P48379 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rfx2P48379 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Rfx2P48379 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.05■□□□□ 0.32
Rfx2P48379 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx2P48379 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.05■□□□□ 0.32
Rfx2P48379 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx2P48379 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.05■□□□□ 0.32
Rfx2P48379 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Gm24589-201ENSMUST00000116692 94 ntBASIC17.04■□□□□ 0.32
Rfx2P48379 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.04■□□□□ 0.32
Rfx2P48379 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.04■□□□□ 0.32
Rfx2P48379 Gm18421-201ENSMUST00000204122 625 ntBASIC17.04■□□□□ 0.32
Rfx2P48379 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rfx2P48379 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx2P48379 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.03■□□□□ 0.32
Rfx2P48379 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx2P48379 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rfx2P48379 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx2P48379 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx2P48379 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rfx2P48379 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx2P48379 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfx2P48379 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Rfx2P48379 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Rfx2P48379 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Rfx2P48379 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms