Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.33■□□□□ 0.36
HttP42859 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Gm18187-201ENSMUST00000196476 984 ntBASIC17.33■□□□□ 0.36
HttP42859 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HttP42859 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HttP42859 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.32■□□□□ 0.36
HttP42859 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HttP42859 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.32■□□□□ 0.36
HttP42859 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Iqck-206ENSMUST00000208658 2891 ntBASIC17.32■□□□□ 0.36
HttP42859 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.32■□□□□ 0.36
HttP42859 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HttP42859 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.32■□□□□ 0.36
HttP42859 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.32■□□□□ 0.36
HttP42859 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HttP42859 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HttP42859 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HttP42859 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HttP42859 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Gm25287-201ENSMUST00000103846 110 ntBASIC17.31■□□□□ 0.36
HttP42859 Gm22918-201ENSMUST00000103855 110 ntBASIC17.31■□□□□ 0.36
HttP42859 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.31■□□□□ 0.36
HttP42859 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.31■□□□□ 0.36
HttP42859 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HttP42859 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HttP42859 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HttP42859 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.3■□□□□ 0.36
HttP42859 Gm10253-201ENSMUST00000194270 940 ntBASIC17.3■□□□□ 0.36
HttP42859 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.3■□□□□ 0.36
HttP42859 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HttP42859 Gm12151-201ENSMUST00000121374 290 ntBASIC17.3■□□□□ 0.36
HttP42859 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HttP42859 Mir6404-201ENSMUST00000183699 94 ntBASIC17.3■□□□□ 0.36
HttP42859 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HttP42859 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HttP42859 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.29■□□□□ 0.36
HttP42859 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
HttP42859 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HttP42859 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HttP42859 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.29■□□□□ 0.36
HttP42859 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HttP42859 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HttP42859 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HttP42859 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms