Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col18a1P39061 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Col18a1P39061 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC21.66■■□□□ 1.06
Col18a1P39061 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col18a1P39061 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col18a1P39061 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col18a1P39061 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col18a1P39061 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col18a1P39061 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col18a1P39061 Gm25287-201ENSMUST00000103846 110 ntBASIC21.65■■□□□ 1.06
Col18a1P39061 Gm22918-201ENSMUST00000103855 110 ntBASIC21.65■■□□□ 1.06
Col18a1P39061 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col18a1P39061 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Col18a1P39061 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col18a1P39061 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col18a1P39061 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col18a1P39061 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col18a1P39061 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC21.64■■□□□ 1.06
Col18a1P39061 Gm18246-201ENSMUST00000221023 728 ntBASIC21.64■■□□□ 1.06
Col18a1P39061 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.64■■□□□ 1.06
Col18a1P39061 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col18a1P39061 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col18a1P39061 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col18a1P39061 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Col18a1P39061 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.64■■□□□ 1.05
Col18a1P39061 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC21.64■■□□□ 1.05
Col18a1P39061 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Col18a1P39061 Gm37277-201ENSMUST00000194052 1111 ntBASIC21.64■■□□□ 1.05
Col18a1P39061 Gm8969-201ENSMUST00000199694 526 ntBASIC21.64■■□□□ 1.05
Col18a1P39061 AC127302.2-201ENSMUST00000215212 268 ntBASIC21.64■■□□□ 1.05
Col18a1P39061 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.63■■□□□ 1.05
Col18a1P39061 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 AC126250.1-201ENSMUST00000228343 1768 ntBASIC21.63■■□□□ 1.05
Col18a1P39061 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC21.63■■□□□ 1.05
Col18a1P39061 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC21.63■■□□□ 1.05
Col18a1P39061 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.63■■□□□ 1.05
Col18a1P39061 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col18a1P39061 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col18a1P39061 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col18a1P39061 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC21.61■■□□□ 1.05
Col18a1P39061 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Gm15693-201ENSMUST00000120470 637 ntBASIC21.61■■□□□ 1.05
Col18a1P39061 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Col18a1P39061 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC21.61■■□□□ 1.05
Col18a1P39061 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC21.61■■□□□ 1.05
Col18a1P39061 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col18a1P39061 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.61■■□□□ 1.05
Col18a1P39061 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col18a1P39061 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col18a1P39061 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Gm12151-201ENSMUST00000121374 290 ntBASIC21.6■■□□□ 1.05
Col18a1P39061 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC21.6■■□□□ 1.05
Col18a1P39061 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col18a1P39061 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col18a1P39061 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col18a1P39061 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Col18a1P39061 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Col18a1P39061 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Gm9385-201ENSMUST00000117563 472 ntBASIC21.59■■□□□ 1.05
Col18a1P39061 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms