Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.31□□□□□ -0.12
Upk2P38575 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.31□□□□□ -0.12
Upk2P38575 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.31□□□□□ -0.12
Upk2P38575 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Upk2P38575 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk2P38575 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upk2P38575 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.3□□□□□ -0.12
Upk2P38575 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.3□□□□□ -0.12
Upk2P38575 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.3□□□□□ -0.12
Upk2P38575 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Upk2P38575 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk2P38575 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upk2P38575 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk2P38575 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk2P38575 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upk2P38575 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upk2P38575 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.29□□□□□ -0.12
Upk2P38575 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk2P38575 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Upk2P38575 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk2P38575 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Upk2P38575 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Upk2P38575 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Upk2P38575 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Upk2P38575 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk2P38575 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.28□□□□□ -0.12
Upk2P38575 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Gm9013-201ENSMUST00000132939 882 ntBASIC14.28□□□□□ -0.12
Upk2P38575 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk2P38575 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Upk2P38575 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Upk2P38575 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Upk2P38575 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms