Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox5P35710 Gm7370-201ENSMUST00000219471 767 ntBASIC17.81■□□□□ 0.44
Sox5P35710 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox5P35710 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox5P35710 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox5P35710 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sox5P35710 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Sox5P35710 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox5P35710 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sox5P35710 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.79■□□□□ 0.44
Sox5P35710 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.79■□□□□ 0.44
Sox5P35710 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.79■□□□□ 0.44
Sox5P35710 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.79■□□□□ 0.44
Sox5P35710 Gm8520-201ENSMUST00000186517 868 ntBASIC17.79■□□□□ 0.44
Sox5P35710 Gm36967-201ENSMUST00000193814 266 ntBASIC17.79■□□□□ 0.44
Sox5P35710 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sox5P35710 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox5P35710 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Gm18421-201ENSMUST00000204122 625 ntBASIC17.78■□□□□ 0.44
Sox5P35710 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox5P35710 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sox5P35710 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox5P35710 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.77■□□□□ 0.44
Sox5P35710 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.77■□□□□ 0.44
Sox5P35710 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sox5P35710 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox5P35710 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms